
Seeing Red in New England Waters
WHOI researchers detect a massive bloom of algae before it hits the coast
Coastal resource managers shut down shellfish beds in three New England states in mid-May—including rare closures of Massachusetts Bay and Cape Cod Bay—because of an intense bloom of the toxic algae Alexandrium fundyense. Researchers from the Woods Hole Oceanographic Institution saw the “red tide” coming before its toxic effects reached the shore.
The bloom of Alexandrium—the worst since 1972—began just as biologists and oceanographers departed Woods Hole on May 9 on R/V Oceanus for a long-planned research expedition to study the harmful algae. Within hours of reaching open waters east of Boston and Cape Ann, the team led by physical oceanographer Dennis McGillicuddy and marine biologists Deana Erdner and Bruce Keafer found hundreds to thousands of algal cells in every liter of water sampled from the ocean.
McGillicuddy and Keafer traded daily cell phone and e-mail messages with their counterparts on land, including WHOI Senior Scientist Don Anderson and colleagues from several fishery and water resource agencies in Massachusetts, New Hampshire, and Maine. Though some shellfish beds in Maine and New Hampshire were closed just before the cruise, managers in Massachusetts had not yet detected toxic algae within the Bay. It was just a matter of time.
Sailing right into the bloom
On an expedition that took them from edge of Boston Harbor to the middle of the Bay of Fundy, the WHOI researchers worked around the clock for eight days. They collected nearly 500 water samples from 160 locations in the Gulf of Maine as they surveyed and mapped the location of Alexandrium cells. Using novel genetic probe techniques developed at WHOI and the Monterey Bay Aquarium Research Institute, the shipboard scientists were able to rapidly detect and quantify the amount of harmful algae in offshore waters. At the same time, researchers on the ship and at Dartmouth College provided oceanographic models of where ocean currents were likely to carry the cells.
The researchers detected a mother lode of Alexandrium on the western edge of the Gulf of Maine and in Massachusetts Bay. The algae are notorious for producing a toxin that accumulates in clams, mussels, and other shellfish and can cause paralytic shellfish poisoning (PSP) in humans who consume them. Alexandrium is naturally distributed throughout New England waters, though it typically develops into large-scale blooms only in waters off Maine and Canada, with intensities varying from year to year.
The research expedition was the first ever for the Woods Hole Center for Oceans and Human Health, a new center funded by the National Science Foundation and the National Institute of Environmental Health Sciences. (See “Risks and Remedies from the Sea.”) The purpose of the research cruise was to analyze and model how physical, chemical, and biological factors combine to distribute and disperse Alexandrium throughout New England waters. Researchers also hoped to discern how those factors can naturally select for certain strains of the organism—which vary widely in their toxicity—to favor blooms at different times.
An assortment of possible causes
In most years, natural current and wind patterns keep the cells from flowing into the coastal waters of southern New England. But during a spring marked by unusual amounts of rain and snowmelt and steady stream of northerly and easterly winds—capped by nor’easters on May 7-8 and May 24—ocean conditions developed almost perfectly for a massive bloom.
Anderson and McGillicuddy offered several possible explanations for the widespread algae bloom. The first is that the unusual weather patterns this spring—particularly the wind-driven currents from the north—pushed an abundance of Alexandrium cells south into Massachusetts Bay and Cape Cod Bay. Another idea is that there was a larger source of cells in the Gulf of Maine, following an intense bloom off western Maine in autumn 2004. Or perhaps the record-setting precipitation of this winter and spring flushed more fresh water and nutrients into the coastal region, creating better conditions for the cells to grow and reproduce. Finally, ocean conditions this year may have favored a particular strain, or genotype, of Alexandrium in the western Gulf of Maine.
In response to the large-scale bloom, WHOI researchers have been granted “rapid response” funds from the Center for Sponsored Coastal Ocean Research at the National Ocean Service to follow up and extend their studies of this bloom for several more weeks. Using WHOI’s coastal research vessel Tioga, McGillicuddy and Keafer will conduct at least two more surveys of Massachusetts Bay and Cape Cod Bay in June.
In the coming months, marine biologists will examine the genetic makeup of the cells they collected to decipher the diversity of the Alexandrium population. Chemists will analyze dissolved nutrients in water samples to find the natural blends that promote or hamper the algae’s growth. Physical oceanographers at WHOI, Dartmouth, and the Northeast Fisheries Science Center will refine their models of how ocean currents and North Atlantic weather patterns affect the distribution and intensity of Alexandrium blooms. Together they will sort out the confluence of factors that produce harmful algal blooms in New England waters.
Slideshow

Slideshow
- MAPPING THE BLOOM—These maps of coastal New England waters reveal the distribution of the harmful algae Alexandrium as surveyed by scientists from May 10-16 on their way north, and again on May 16-18 as they were cruising south. (The ship did not survey below the latitude of Boston.) Bright reds and oranges depict areas with the highest concentrations of algae; blues show area of minimal concentration. The evenly spaced white dots mark the locations where WHOI scientists collected water samples on the May 9-18 expedition. (Woods Hole Oceanographic Institution illustration)
- WHOI researchers attach hooks to retrieve a CTD rosette, which collects water samples and measures conductivity, temperature, salinity, and other water properties. The research team raised and lowered the CTD 160 times on an nine-day expedition, collecting nearly 500 samples. (Photo by Mike Carlowicz, Woods Hole Oceanographic Institution)
- A CTD is raised after collecting water samples in the Gulf of Maine. (Photo by Mike Carlowicz, WHOI)
- MIT/WHOI Joint Program student Mike Brosnahan pours water samples through sieves that collect algae and other microscopic plants. (Photo by Mike Carlowicz, WHOI)
- Working in the wet lab onboard R/V Oceanus, Deana Erdner, Research Associate in the WHOI Biology Department, prepares Alexandrium-filled water samples for testing back in shore-based labs. (Photo by Mike Carlowicz, WHOI)
- Deana Erdner examines water samples under a microscope to make a preliminary estimate of Alexandrium cells before other samples can be analyzed with other molecular and genetic techniques ((Photo by Mike Carlowicz, WHOI)
- Bruce Keafer, Research Associate in Biology, helps recover a sediment core sampler that was lowered to the seafloor from the fantail of the R/V Oceanus. (Photo by Mike Carlowicz, WHOI)
- Bruce Keafer, Research Associate in Biology, holds a sediment sample retrieved from the Gulf of Maine. Cells in the sandy mud should allow researchers to learn about past and potential future blooms of Alexandrium. (Photo by Mike Carlowicz, WHOI)
- Dennis McGillicuddy, Associate Scientist in Applied Ocean Physics and Engineering (AOP&E), assembles a drifter that will track ocean currents in the Gulf of Maine. The drifters were built by James Manning of the Northeast Fisheries Science Center, who tracked them from shore (via satellite) after McGillicuddy launched them. (Photo by Mike Carlowicz, WHOI)
- Dennis McGillicuddy, Associate Scientist (AOP&E), and Ruoying He (right), Assistant Scientist (AOP&E) deploy a drifter in the Bay of Fundy. (Photo by Mike Carlowicz, WHOI)